---
name: "vcfglxgt"
section: "1"
platform: "linux"
package: "libvcflib-tools"
version: "1.0.12+dfsg-1"
release: "Debian 13 (Trixie)"
platforms: ["linux"]
url: "https://new.carta.tech/vcfglxgt"
---

# vcfglxgt(1)

## NAME

**vcfglxgt**

## SYNOPSIS

**vcfglxgt** options

## DESCRIPTION

Set genotypes using the maximum genotype likelihood for each sample.

## OPTIONS

-

  ```
  options:
      -n, --fix-null-genotypes   only apply to null and partly-null genotypes
  Type: transformation
  ```

## EXIT VALUES

- **0**

  Success

- **not 0**

  Failure

## SEE ALSO

[**vcflib**(1)](/vcflib/1.md)

## OTHER

## LICENSE

Copyright 2011-2024 (C) Erik Garrison and vcflib contributors. MIT licensed. Copyright 2020-2024 (C) Pjotr Prins.

## AUTHORS

Erik Garrison and vcflib contributors.