---
name: "transit"
section: "1"
platform: "linux"
package: "tnseq-transit"
version: "3.3.12-1"
release: "Debian 13 (Trixie)"
platforms: ["linux"]
url: "https://new.carta.tech/transit"
---

# transit(1)

statistical calculations of essentiality of genes or genomic regions

## NAME

transit - statistical calculations of essentiality of genes or genomic regions

## SYNOPSIS

**python** */usr/bin/transit \<method\>*

## DESCRIPTION

For commandline mode, please use one of the known methods (or see documentation to add a new one): Analysis methods:

-

  \- example - gumbel - binomial - griffin - hmm - resampling - tn5gaps - rankproduct - utest - GI - anova - zinb - pathway\_enrichment - tnseq\_stats - corrplot - heatmap

### Other functions:

-

  \- normalize - convert - export