NAME
tff_convert_tractogram.py - convert tractograms files to updated file format
DESCRIPTION
usage: tff_convert_tractogram.py [-h] [--reference REFERENCE]
- [--positions_dtype {float16,float32,float64}]
-
[--offsets_dtype {uint32,uint64}] [-f] IN_TRACTOGRAM OUT_TRACTOGRAM
Conversion of '.tck', '.trk', '.fib', '.vtk', '.trx' and 'dpy' files using updated file format standard. TCK file always needs a reference file, a NIFTI, for conversion. The FIB file format is in fact a VTK, MITK Diffusion supports it.
positional arguments:
- IN_TRACTOGRAM
-
Tractogram filename. Format must be one of trk, tck, vtk, fib, dpy, trx.
- OUT_TRACTOGRAM
-
Output filename. Format must be one of trk, tck, vtk, fib, dpy, trx.
options:
- -h, --help
-
show this help message and exit
- --reference REFERENCE
-
Reference anatomy for tck/vtk/fib/dpy file support (.nii or .nii.gz).
- -f
-
Force overwriting of the output files.
Data type options:
- --positions_dtype {float16,float32,float64}
-
Specify the datatype for positions for trx. [float32]
- --offsets_dtype {uint32,uint64}
-
Specify the datatype for offsets for trx. [uint64]