---
name: "surpyvor"
section: "1"
platform: "linux"
package: "surpyvor"
version: "0.5-2"
release: "Debian 13 (Trixie)"
platforms: ["linux"]
url: "https://new.carta.tech/surpyvor"
---

# surpyvor(1)

modification of VCF files with SURVIVOR

## NAME

surpyvor - modification of VCF files with SURVIVOR

## DESCRIPTION

usage: surpyvor \[-h\] \[-v\] {merge,highsens,highconf,prf,venn,upset} ...

A wrapper around SURVIVOR, with convenience functions.

### optional arguments:

- **-h**, **--help**

  show this help message and exit

- **-v**, **--version**

  Print version and quit.

### \[sub-commands\]:

-

  {merge,highsens,highconf,prf,venn,upset}

- merge

  merging vcf files of SVs

- highsens

  get union of SV vcfs

- highconf

  get intersection of SV vcfs

- prf

  calculate precision, recall and F-measure

- venn

  Make venn diagram for 2 or 3 SV vcf files

- upset

  Make upset plot for multiple SV vcf files

## AUTHOR

 This manpage was written by Nilesh Patra for the Debian distribution and\
  can be used for any other usage of the program.