NAME
surpyvor - modification of VCF files with SURVIVOR
DESCRIPTION
usage: surpyvor [-h] [-v] {merge,highsens,highconf,prf,venn,upset} ...
A wrapper around SURVIVOR, with convenience functions.
optional arguments:
- -h, --help
-
show this help message and exit
- -v, --version
-
Print version and quit.
[sub-commands]:
-
{merge,highsens,highconf,prf,venn,upset}
- merge
-
merging vcf files of SVs
- highsens
-
get union of SV vcfs
- highconf
-
get intersection of SV vcfs
- prf
-
calculate precision, recall and F-measure
- venn
-
Make venn diagram for 2 or 3 SV vcf files
- upset
-
Make upset plot for multiple SV vcf files
AUTHOR
This manpage was written by Nilesh Patra for the Debian distribution and
can be used for any other usage of the program.