statreport1

Usage

Overview

Compute summary statistics for tab-delimited data files.

All options:

-h, –help

Produce help message.

-V, –verbose

Output more log messages on stderr.

-s arg (=10%), –skip arg (=10%)

Number of initial lines to skip.

-x arg (=1), –subsample arg (=1)

Factor by which to sub-sample.

-u arg, –until arg

Read up to this iteration.

-I arg, –ignore arg

Do not analyze these fields.

-S arg, –select arg

Analyze only these fields.

-i, –individual

Show results for individual files separately also.

–truth arg

True value

–min arg

Required minimum number of lines to read.

–mean

Show mean and standard deviation.

–mode

Show mode (with precision)

–log-mean

Show log mean of X given log X.

–median

Show median and confidence level.

–confidence arg (=0.95)

Confidence interval levels (colon-separated).

–BCI arg (=HPD)

Type of Bayesian Credible Interval (BCI): HPD or central

-p arg (=4), –precision arg (=4)

Number of significant figures.

Reporting bugs:

BAli-Phy online help: ⟨http://www.bali-phy.org/docs.php⟩\c .

Please send bug reports to ⟨[email protected]⟩\c .