starchcluster_sge1
Manual page for starchcluster_sge 2.4.41+dfsg
Usage
starchcluster_sge [--help]
[--clean]
<input-bed-file>
[output-starch-file]
Overview
-
Pass in the name of a BED file to create a starch archive using the cluster.
-
(stdin isn't supported through this wrapper script, but starch supports it natively.)
-
Add
--cleanto remove <input-bed-file> after starching it up.
-
You can pass in the name of the output starch archive to be created. Otherwise, the output will have the same name as the input file, with an additional
- '.starch' ending.
-
If the input file ends with '.bed', that will be stripped off.