NAME
simkaMerge - comparative metagenomics method dedicated to NGS datasets
DESCRIPTION
ERROR: Unknown parameter '-h' ERROR: Option '-nb-cores' is mandatory ERROR: Option '-kmer-size' is mandatory ERROR: Option '-in' is mandatory ERROR: Option '-out-tmp-simka' is mandatory ERROR: Option '-partition-id' is mandatory ERROR: Option '-nb-cores' is mandatory ERROR: Option '-max-memory' is mandatory ERROR: Option '-kmer-shannon-index' is mandatory
[SimkaMerge options]
- -nb-cores
-
(1 arg) : number of cores [default '0']
- -verbose
-
(1 arg) : verbosity level [default '1']
- -version
-
(0 arg) : version
- -help
-
(0 arg) : help
- -nb-cores
-
(1 arg) : nb cores
- -kmer-size
-
(1 arg) : kmer size
- -in
-
(1 arg) : input filename
- -out-tmp-simka
-
(1 arg) : tmp output
- -partition-id
-
(1 arg) : bank name
- -nb-cores
-
(1 arg) : bank name
- -max-memory
-
(1 arg) : bank name
- -kmer-shannon-index (1 arg) :
-
bank name
- -simple-dist
-
(0 arg) : compute simple distances
- -complex-dist
-
(0 arg) : compute complex distances
AUTHOR
This manpage was written by Shayan Doust for the Debian distribution and can be used for any other usage of the program.