sim_reads(1)

Convert Fastq sequences to Fasta sequences.

NAME

sim_reads - Convert Fastq sequences to Fasta sequences.

SYNOPSIS

sim_reads ref.fa reads.fa

DESCRIPTION

sim_reads - Simulate sequencing reads from references.

Allowed Options:

--depth arg (=30): sequencing depth of the sample

--error_rate arg (=0.01): error rate

--read_length arg (=100): read length

--paired: if paired-end

--sd arg (=-1): sd

--insert_distance arg (=500): insert distance

--print_correct: output correct reads

AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and
can be used for any other usage of the program.