NAME
salmon - highly-accurate, transcript-level quantification estimates from RNA-seq data
SYNOPSIS
salmon -h|--help or
DESCRIPTION
salmon v1.10.2
-
salmon -v|--version or salmon -c|--cite or salmon [--no-version-check] <COMMAND> [-h | options]
Commands:
- index
-
: create a salmon index
- quant
-
: quantify a sample
- alevin
-
: single cell analysis
- swim
-
: perform super-secret operation
-
quantmerge : merge multiple quantifications into a single file