pxtgen(1)

NAME

pxtgen - generate all tree topologies for n taxa

SYNOPSIS

pxtgen [OPTIONS]...

DESCRIPTION

Generate all tree topologies for n (<= 10) taxa. Random tree samples are a-coming.

OPTIONS

-n, --ntax=INT: number of taxa

-r, --rooted: whether generated trees are rooted (default: false)

-c, --count: give the number of possible trees for n taxa and exit

-l, --label=STRING: prefix label for taxon names (default: 't')

-o, --outf=FILE: output file, STOUT otherwise

-h, --help: display this help and exit

-V, --version: display version and exit

-C, --citation: display phyx citation and exit

CITATION

Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063.

AUTHOR

Written by Joseph W. Brown

REPORTING BUGS

Report bugs to: <https://github.com/FePhyFoFum/phyx/issues> phyx home page: <https://github.com/FePhyFoFum/phyx>