pxt2new1
Convert from tree file to newick format
Usage
pxt2new [OPTIONS] ...
Overview
This will convert a tree file to newick. This will take a newick- or nexus-formatted tree from a file or STDIN.
Options
-
-t, --treef=FILE -
input tree file, STDIN otherwise
-
-o, --outf=FILE -
output tree file, STOUT otherwise
-
-h, --help -
display this help and exit
-
-V, --version -
display version and exit
-
-C, --citation -
display phyx citation and exit
Citation
Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063.
History
- Debian 13 (Trixie): the text shown here
- Debian 12 (Bookworm)
- Debian 10 (Buster)
--citation since Debian 12 (Bookworm);
-C since Debian 12 (Bookworm).