NAME
pmrna - filter out all but the primary isoform from each gene of the input
SYNOPSIS
pmrna [options] < annot.gff3 > new.gff3
DESCRIPTION
Options:
- -h|--help
-
print this help message and exit
- -i|--introns
-
flag indicating that introns are declared explicitly and do not need to be inferred from exon features; default is to infer introns
- -l|--locus
-
report a single representative mRNA for each locus instead of each gene
- -m|--map: FILE
-
write each gene/mRNA mapping to the specified file
- -p|--pseudogenes
-
disable pseudogene detection and correction