NAME
plot_res - determine features of organisms, clades, taxonomic units, genes
SYNOPSIS
plot_res [-h] [--feature_font_size FEATURE_FONT_SIZE] [--format {png,svg,pdf}] [--dpi DPI] [--title TITLE] [--title_font_size TITLE_FONT_SIZE] [--class_legend_font_size CLASS_LEGEND_FONT_SIZE] [--width WIDTH] [--height HEIGHT] [--left_space LS] [--right_space RS] [--orientation {h,v}] [--autoscale {0,1}] [--background_color {k,w}] [--subclades N_SCL] [--max_feature_len MAX_FEATURE_LEN] [--all_feats ALL_FEATS] [--otu_only] [--report_features] INPUT_FILE OUTPUT_FILE
DESCRIPTION
Plot results
OPTIONS
positional arguments:
- INPUT_FILE
-
tab delimited input file
- OUTPUT_FILE
-
the file for the output image
optional arguments:
- -h, --help
-
show this help message and exit
- --feature_font_size FEATURE_FONT_SIZE
-
the file for the output image
- --format {png,svg,pdf}
-
the format for the output file
--dpi DPI
--title TITLE
--title_font_size TITLE_FONT_SIZE
--class_legend_font_size CLASS_LEGEND_FONT_SIZE
--width WIDTH
- --height HEIGHT
-
only for vertical histograms
--left_space LS
--right_space RS
--orientation {h,v}
--autoscale {0,1}
- --background_color {k,w}
-
set the color of the background
- --subclades N_SCL
-
number of label levels to be displayed (starting from the leaves, -1 means all the levels, 1 is default )
- --max_feature_len MAX_FEATURE_LEN
-
Maximum length of feature strings (def 60)
--all_feats ALL_FEATS
- --otu_only
-
Plot only species resolved OTUs (as opposed to all levels)
- --report_features
-
Report important features to STDOUT
AUTHOR
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.