phast1
Phylogenetic analysis with space/time models
Overview
The PHAST package contains the following programs:
all_dists
|
hmm_view phastBias |
|---|---|
base_evolve
|
indelFit phastCons |
chooseLines
|
indelHistory phastMotif |
clean_genes
|
maf_parse phastOdds |
consEntropy
|
makeHKY phyloBoot |
convert_coords
|
modFreqs phyloFit |
display_rate_matrix
|
msa_diff phyloP |
dless
|
msa_split prequel |
dlessP
|
msa_view refeature |
draw_tree
|
pbsDecode stringiphy |
eval_predictions
|
pbsEncode test |
exoniphy
|
pbsScoreMatrix tree_doctor |
hmm_train
|
pbsTrain treeGen |
hmm_tweak
|
phast |
|
For help, type the program's name followed by |
Releases
Unchanged in 4 releases since Debian 10 (Buster).