NAME
palindrome - Finds inverted repeats in nucleotide sequence(s)
SYNOPSIS
palindrome -sequence seqall -minpallen integer -maxpallen integer -gaplimit integer -nummismatches integer -outfile outfile -overlap boolean
palindrome -help
DESCRIPTION
palindrome is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Nucleic:Repeats" command group(s).
OPTIONS
Input section
- -sequence seqall
Required section
- -minpallen integer
-
Default value: 10
- -maxpallen integer
-
Default value: 100
- -gaplimit integer
-
Default value: 100
- -nummismatches integer
Output section
- -outfile outfile
- -overlap boolean
-
Default value: Y
BUGS
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).
SEE ALSO
palindrome is fully documented via the tfm(1) system.
AUTHOR
Debian Med Packaging Team <[email protected]>
Wrote the script used to autogenerate this manual page.
COPYRIGHT
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.