mia-3dlandmarks-transform1
Transform 3d landmark positions.
Usage
mia-3dlandmarks-transform -i
<in-file>
-o
<out-file>
-t
<transformation>
[options]
Overview
mia-3dlandmarks-transform Transform the locations of the landmarks by means of a given 3D transformation. Note, landmark transformations do the inverse of an image transformation (in a manner of speaking), i.e. given a transformation V(x) in an image transformation the pixel intensity at x is set to the original intensity at V(x), while a landmark at x is moved to V(x).
Options
- -i --in-file=(input, required); io
-
input landmark set
For supported file types see PLUGINS:3dlandmarklist/io
- -o --out-file=(output, required); io
-
output landmark set
For supported file types see PLUGINS:3dlandmarklist/io
- -t --transformation=(input, required); io
-
transformation file
For supported file types see PLUGINS:3dtransform/io
Help & Info
- -V --verbose=warning
-
verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:
trace ‐ Function call trace
debug ‐ Debug output
info ‐ Low level messages
message ‐ Normal messages
warning ‐ Warnings
fail ‐ Report test failures
error ‐ Report errors
fatal ‐ Report only fatal errors
-
--copyright -
print copyright information
-
-h --help -
print this help
-
-? --usage -
print a short help
-
--version -
print the version number and exit
Processing
-
--threads=-1 -
Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).
PLUGINS: 3dlandmarklist/io
datapool-
Virtual IO to and from the internal data pool
Recognized file extensions: .@
lmx-
IO plugin to load and store 3D landmark lists
Recognized file extensions: .lmx
PLUGINS: 3dtransform/io
bbs-
Binary (non-portable) serialized IO of 3D transformations
Recognized file extensions: .bbs
datapool-
Virtual IO to and from the internal data pool
Recognized file extensions: .@
vista-
Vista storage of 3D transformations
Recognized file extensions: .v, .v3dt
xml-
XML serialized IO of 3D transformations
Recognized file extensions: .x3dt
Examples
Transform the landmarks given in input.lmx by applyning the transfromation stored in trans.v and store the result in output.lmx
mia-3dlandmarks-transform -i input.lmx -t trans.v -o output.lmx
AUTHOR(s)
Gert Wollny
History
- Debian 12 (Bookworm): the text shown here
- Debian 11 (Bullseye)
- Debian 10 (Buster)
- Debian 9 (Stretch)
- Debian 8 (Jessie)