NAME
mia-2dmyoseries-compdice - Evaluate the dice index between segmentations.
SYNOPSIS
mia-2dmyoseries-compdice -1 <first> -2 <second> [options]
DESCRIPTION
mia-2dmyoseries-compdice This program is used to evaluate the per-frame dice index of segmented regions of two image series
OPTIONS
- -1 --first=(required, input); string
-
first segmentation set
- -2 --second=(required, input); string
-
second segmentation set
- -k --skip=2
-
images to skip atthe begin of the series
Help & Info
- -V --verbose=warning
-
verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:
trace ‐ Function call trace
debug ‐ Debug output
info ‐ Low level messages
message ‐ Normal messages
warning ‐ Warnings
fail ‐ Report test failures
error ‐ Report errors
fatal ‐ Report only fatal errors
- --copyright
-
print copyright information
- -h --help
-
print this help
- -? --usage
-
print a short help
- --version
-
print the version number and exit
Processing
- --threads=-1
-
Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).
EXAMPLE
Evaluate the per-frame dice index of the segmentations of set segment.set with respect to the segmentation set reference.set skipping two images at the beginning.
mia-2dmyoseries-compdice -i segment.set -r reference.set -k 2
AUTHOR(s)
Gert Wollny
COPYRIGHT
This software is Copyright (c) 1999‐2015 Leipzig, Germany and Madrid, Spain. It comes with ABSOLUTELY NO WARRANTY and you may redistribute it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 (or later). For more information run the program with the option '--copyright'.