NAME
mecat - Generate config file or assemble, trim or correct SMRT data
SYNOPSIS
mecat correct|assemble|config cfg_fname
DESCRIPTION
MECAT (v2) is an ultra-fast and accurate mapping, error correcting and de novo assembly tools for single molecula sequencing (SMRT) reads.
The parameters are defined as below:
- correct:
-
Correct rawreads
- trim:
-
Trim corrected reads
- assemble:
-
Generate contigs
- config:
-
Generate default config file