NAME
masai_indexer - Masai Indexer
SYNOPSIS
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masai_indexer [OPTIONS] <GENOME FILE>
DESCRIPTION
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Masai is a fast and accurate read mapper based on approximate seeds and multiple backtracking.
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See http://www.seqan.de/projects/masai for more information.
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(c) Copyright 2011-2012 by Enrico Siragusa.
-h, --help
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Displays this help message.
--version
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Display version information
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Genome Index Options:
-x, --index STR
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Select the genome index type. One of esa, sa, qgram, and fm. Default: sa.
-xp, --index-prefix STR
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Specify an genome index prefix name. Default: use the genome filename prefix.
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Output Options:
-t, --tmp-folder STR
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Specify a huge temporary folder. Default: use the genome folder.
VERSION
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masai_indexer version: 0.7.1 [14053] Last update 2013-05-16