vcfsample2info(1)

vcfsample2info1

Usage

vcfsample2info options

Overview

Take annotations given in the per-sample fields and add the mean, median, min, or max to the site-level INFO.

Options

options:
    -f, --field         Add information about this field in samples to INFO column
    -i, --info          Store the computed statistic in this info field
    -a, --average       Take the mean of samples for field (default)
    -m, --median        Use the median
    -n, --min           Use the min
    -x, --max           Use the max

Exit status

0

Success

not 0

Failure

Other

Releases

3 releases since Debian 11 (Bullseye); the text changed 2 times.

  1. 11
  2. 12
  3. 13

License

Copyright 2011-2024 (C) Erik Garrison and vcflib contributors. MIT licensed. Copyright 2020-2024 (C) Pjotr Prins.

Authors

Erik Garrison and vcflib contributors.

From libvcflib-tools 1.0.12+dfsg-1 in Debian 13 (Trixie). Parsed by carta from the page's man source.