tofu1
Toolkit for tomographic data reconstruction
Overview
usage: tofu [-h] [--config FILE] [--version]
-
{init,preprocess,flatcorrect,sinos,tomo,lamino,reco,gui,flow,ez,estimate,perf,interactive,find-large-spots} ...
options:
-
-h, --help -
show this help message and exit
-
--config FILE -
File name of configuration
-
--version -
show program's version number and exit
Commands:
-
{init,preprocess,flatcorrect,sinos,tomo,lamino,reco,gui,flow,ez,estimate,perf,interactive,find-large-spots}
- init
-
Create configuration file
- preprocess
-
Run preprocessing
- flatcorrect
-
Run flat field correction
- sinos
-
Generate sinograms from projections
- tomo
-
Run tomographic reconstruction
- lamino
-
Run laminographic reconstruction
- reco
-
Run general projection-based reconstruction for tomographic/laminographic cone/parallel beam
- gui
-
GUI for tomographic reconstruction
- flow
-
Visual flow creation
- ez
-
GUI for making ufo-kit data processing pipelines
- estimate
-
Estimate center of rotation
- perf
-
Check reconstruction performance
- interactive
-
Run interactive mode
- find-large-spots
-
Find large spots on images