surpyvor1
Modification of vcf files with survivor
Overview
usage: surpyvor [-h] [-v] {merge,highsens,highconf,prf,venn,upset} ...
A wrapper around SURVIVOR, with convenience functions.
optional arguments:
-
-h, --help -
show this help message and exit
-
-v, --version -
Print version and quit.
[sub-commands]:
|
{merge,highsens,highconf,prf,venn,upset} |
|
merge
|
merging vcf files of SVs |
highsens
|
get union of SV vcfs |
highconf
|
get intersection of SV vcfs |
prf
|
calculate precision, recall and F-measure |
venn
|
Make venn diagram for 2 or 3 SV vcf files |
upset
|
Make upset plot for multiple SV vcf files |
Releases
Unchanged in 2 releases since Debian 12 (Bookworm).