prophet(1e)

prophet1e

Scan one or more sequences with a gribskov or henikoff profile

Usage

prophet -sequence seqall -infile infile -gapopen float -gapextend float -outfile align

prophet -help

Overview

prophet is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Nucleic:Profiles,Protein:Profiles" command group(s).

Options

Input section

-sequence seqall
-infile infile

Required section

-gapopen float

Default value: 1.0

-gapextend float

Default value: 1.0

Output section

-outfile align

Releases

9 releases since Debian 5.0 (Lenny); the text changed 2 times.

  1. 5.0
  2. 6.0
  3. 7–13

Bugs

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

Author

Debian Med Packaging Team <[email protected]>

Wrote the script used to autogenerate this manual page.

From emboss 6.6.0+dfsg-15 in Debian 13 (Trixie). Parsed by carta from the page's man source.