pepwindow1e
Draw a hydropathy plot for a protein sequence
Usage
pepwindow -sequence
sequence
[-datafile
datafile]
[-length
integer]
[-normalize
boolean]
-graph
xygraph
pepwindow -help
Overview
pepwindow is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Protein:Properties" command group(s).
Options
Input section
-
-sequence sequence
-
-datafile datafile -
Default value: Enakai.dat
Additional section
-
-length integer -
Default value: 19
-
-normalize boolean -
Default value: N
Output section
-
-graph xygraph
Releases
9 releases since Debian 5.0 (Lenny); the text changed 2 times.
-normalize since Debian 6.0 (Squeeze).