mecat1
Generate config file or assemble, trim or correct smrt data
Usage
mecat {correct | assemble | config
cfg_fname}
Overview
MECAT (v2) is an ultra-fast and accurate mapping, error correcting and de novo assembly tools for single molecula sequencing (SMRT) reads.
The parameters are defined as below:
correct:
|
Correct rawreads |
|---|---|
trim:
|
Trim corrected reads |
assemble:
|
Generate contigs |
config:
|
Generate default config file |
Releases
Unchanged in 3 releases since Debian 11 (Bullseye).