kmc_dump(1)

kmc_dump1

List k-mers from kmc-generated database

Usage

kmc_dump [options] <kmc_database> <output_file>

Overview

KMC's end product is a database of k-mers stored in compact binary form. The kmc_dump program allows the production of a textual list of k-mers together with their counters for the analysis ran

Options

-ci<value> - exclude k-mers occurring less than <value> times

-cx<value> - exclude k-mers occurring more of than <value> times

Parameters:

<kmc_database> - kmer_counter's output

Copying

KMC is a free software distributed under GNU GPL3 licence for academic, research, and commercial use.

Releases

5 releases since Debian 9 (Stretch); the text changed 4 times.

  1. 9
  2. 10
  3. 11
  4. 12
  5. 13

Author

kmc_dump was originally written by:

Sebastian Deorowicz ([email protected])

Marek Kokot

Szymon Grabowski

Agnieszka Debudaj-Grabysz

From kmc 3.2.4+dfsg-1+b3 in Debian 13 (Trixie). Parsed by carta from the page's man source.