gt-seqtransform(1)

gt-seqtransform1

Perform simple transformations on the given sequence file(s).

Usage

gt seqtransform [option ...] [sequence_file ...]

Overview

-addstopaminos [yes|no]

append stop amino acids (*) to given protein sequences, if not already present (default: no)

-width [value]

set output width for FASTA sequence printing (0 disables formatting) (default: 0)

-o [filename]

redirect output to specified file (default: undefined)

-gzip [yes|no]

write gzip compressed output file (default: no)

-bzip2 [yes|no]

write bzip2 compressed output file (default: no)

-force [yes|no]

force writing to output file (default: no)

-help

display help and exit

-version

display version information and exit

Releases

6 releases since Debian 8 (Jessie); the text changed 5 times.

  1. 8
  2. 9
  3. 10
  4. 11
  5. 12
  6. 13

Reporting bugs

Report bugs to https://github.com/genometools/genometools/issues.

From genometools 1.6.5+ds-2.2 in Debian 13 (Trixie). Parsed by carta from the page's man source.