edamhasinput1e
Find edam ontology terms by has_input relation
Usage
edamhasinput -identifier
string
[-namespace
list]
-sensitive
boolean
-subclasses
boolean
-obsolete
boolean
-edamhasinput
outobo
edamhasinput -help
Overview
edamhasinput is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Ontology:EDAM,Data retrieval:Ontology data" command group(s).
Options
Input section
-
-identifier string
Additional section
-
-namespace list -
By default all terms are returned. Searches can be limited to one or a few namespaces. Default value: *
Advanced section
-
-sensitive boolean -
By default, the query keywords are matched against the EDAM term names (and synonyms) only. This option also matches the keywords against the EDAM term definitions and will therefore (typically) report more matches. Default value: N
-
-subclasses boolean -
Extend the query matches to include all terms which are specialisations (EDAM sub-classes) of the matched type. Default value: N
-
-obsolete boolean -
The default behaviour is to not use or return obsolete terms. This option if set will include all terms. Default value: N
Output section
-
-edamhasinput outobo
Releases
Unchanged in 7 releases since Debian 7 (Wheezy).