dfi(1)

dfi1

The deferred frequency index

Usage

dfi [OPTION] ... --minmax <min_1> <max_1> <database 1> ... --minmax <min_m> <max_m> <database m>

Overview

DFI - The Deferred Frequency Index

dfi [OPTION]... --growth <rho_s> <rho_g> <database 1> <database 2>
dfi [OPTION]... --entropy <rho_s> <alpha> <database 1> <database 2> ... <database m>
-h, --help

displays this help message

-V, --version

print version information

-f, --minmax NUM1 NUM2

solve Frequent Pattern Mining Problem

-g, --growth NUM1 NUM2

solve Emerging Substring Mining Problem

-e, --entropy NUM1 NUM2

solve Entropy Mining Problem

-p, --protein

use AminoAcid alphabet (for proteomes)

-d, --dna

use DNA alphabet (for genomes)

-m, --maximal

output only left and right maximal substrings The default is byte alphabet

Releases

Unchanged in 2 releases since Debian 6.0 (Squeeze).

  1. 6.0–7

Author

dfi was written by David Weese and Marcel H. Schulz.

This manual page was generated using html2man and polished by Soeren Sonnenburg <[email protected]>, for the Debian project (but may be used by others).

From seqan-apps 1.3.1-1 in Debian 7 (Wheezy). Parsed by carta from the page's man source.