dendropy-format1
Convert files from one format to another
Overview
usage: dendropy-format --from [FORMAT] --to [FORMAT] [OPTIONS] <SOURCE-FILE> > DEST-FILE
options:
-
-h, --help -
show this help message and exit
Source:
- source_file
-
Path to source data.
-
-f FORMAT, --from FORMAT -
Format of data source.
-
-d {dna,rna,standard}, --data-type {dna,rna,standard} -
Type of data
Destination:
-
-t FORMAT, --to FORMAT -
Format of data source.
-
-u, --unquoted-underscores -
[NEXUS/Newick:] Do not quote labels with undescores.
-
--recode-uncertain {missing,gap} -
Recode ambiguous or uncertain characters as missing ('?') or gaps ('-')
Releases
3 releases since Debian 11 (Bullseye); the text changed 1 time.
--recode-uncertain since Debian 13 (Trixie);
--unquoted-underscores since Debian 13 (Trixie);
-u since Debian 13 (Trixie).