daligner(1)

daligner1

Local alignment discovery between long nucleotide sequencing reads

Usage

daligner [options] files ...

Overview

These tools permit one to find all significant local alignments between reads encoded in a Dazzler database. The assumption is that the reads are from a Pacific Biosciences RS II long read sequencer. That is, the reads are long and noisy, up to 15% on average.

Options

For a complete description of available commands and their options, see /usr/share/doc/daligner/README.md

Releases

Unchanged in 5 releases since Debian 9 (Stretch).

  1. 9–13

From daligner 1.0+git20240119.335105d-3 in Debian 13 (Trixie). Parsed by carta from the page's man source.