---
name: "maffilter"
section: "1"
platform: "linux"
package: "maffilter"
version: "1.3.1+dfsg-6"
release: "Debian 13 (Trixie)"
platforms: ["linux"]
url: "https://new.carta.tech/maffilter"
---

# maffilter(1)

Filter a Multiple Alignment File

## NAME

maffilter - Filter a Multiple Alignment File

## SYNOPSIS

**maffilter \[options\]**

## AVAILABILITY

All UNIX flavors

## DESCRIPTION

maffilter applies a series of post-processing filter to an input MAF file.

## OPTIONS

You should refer to 'info maffilter' or to the online manual of maffilter for a complete list of available options.

- \--noninteractive

  generates output for redirection in a file.

- param=file

  reads a file for loading options

## AUTHOR

Julien Dutheil.