Reference

maf-sort(1)

Sort MAF-format alignments by sequence name

NAME

maf-sort - Sort MAF-format alignments by sequence name

SYNOPSIS

maf-sort [options] my-alignments.maf

OPTIONS

-h

show this help message and exit

-d

only print duplicate alignments

-n

sort by the n-th sequence (default: 1)

History

-n since Debian 7 (Wheezy).