carta
lefse2circlader.py(1)

lefse2circlader.py1

Determine features of organisms, clades, taxonomic units, genes

Overview

usage: lefse2circlader.py [-h] [-l levels with label]

[INPUT_FILE] [OUTPUT_FILE]

Convert LEfSe output to Circlader input

positional arguments:

INPUT_FILE

the input file [stdin if not present]

OUTPUT_FILE

the output file [stdout if not present]

optional arguments:

-h, --help

show this help message and exit

-l levels with label

Author

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.

From lefse 1.1.2-2 in Debian 13 (Trixie). Parsed by carta from the page's man source.