---
name: "lefse2circlader.py"
section: "1"
platform: "linux"
package: "lefse"
version: "1.1.2-2"
release: "Debian 13 (Trixie)"
platforms: ["linux"]
url: "https://new.carta.tech/lefse2circlader.py"
---

# lefse2circlader.py(1)

determine features of organisms, clades, taxonomic units, genes

## NAME

lefse2circlader.py - determine features of organisms, clades, taxonomic units, genes

## DESCRIPTION

usage: lefse2circlader.py \[-h\] \[-l levels with label\]

-

  \[INPUT\_FILE\] \[OUTPUT\_FILE\]

Convert LEfSe output to Circlader input

### positional arguments:

- INPUT\_FILE

  the input file \[stdin if not present\]

- OUTPUT\_FILE

  the output file \[stdout if not present\]

### optional arguments:

- **-h**, **--help**

  show this help message and exit

**-l** levels with label

## AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.