---
name: "lefse2circlader"
section: "1"
platform: "linux"
package: "lefse"
version: "1.0.8-3"
release: "Debian 11 (Bullseye)"
platforms: ["linux"]
url: "https://new.carta.tech/lefse2circlader"
---

# lefse2circlader(1)

determine features of organisms, clades, taxonomic units, genes

## NAME

lefse2circlader - determine features of organisms, clades, taxonomic units, genes

## SYNOPSIS

**lefse2circlader** \[-h\] \[-l levels with label\] \[INPUT\_FILE\] \[OUTPUT\_FILE\]

## DESCRIPTION

Convert LEfSe output to Circlader input

## OPTIONS

### positional arguments:

- INPUT\_FILE

  the input file \[stdin if not present\]

- OUTPUT\_FILE

  the output file \[stdout if not present\]

### optional arguments:

- **-h**, **--help**

  show this help message and exit

**-l** levels with label

## AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.