NAME
ktImportRDPComparison - explore hierarchical metagenomic data with zoomable pie charts
DESCRIPTION
-
Creates a Krona chart from an RDP library comparison.
-
ktImportRDPComparison [options] rdp_comparison [name1] [name2]
- rdp_comparison
-
RDP comparison result downloaded as text.
- name
-
A name for each library to appear in the chart. The default is "Library [1/2]".
- [-o <string>]
-
Output file name. [Default: 'rdp.comp.krona.html']
- [-n <string>]
-
Name of the highest level. [Default: 'root']
- [-d <integer>]
-
Maximum depth of wedges to include in the chart.
- [-x <integer>]
-
Hue (0-360) for "bad" scores. [Default: '0']
- [-y <integer>]
-
Hue (0-360) for "good" scores. [Default: '120']
- [-u <string>]
-
URL of Krona resources to use instead of bundling them with the chart (e.g. "http://krona.sourceforge.net"). Reduces size of charts and allows updates, though charts will not work without access to this URL.