---
name: "kraken-mpa-report"
section: "1"
platform: "linux"
package: "kraken"
version: "1.1.1-4"
release: "Debian 13 (Trixie)"
platforms: ["linux"]
url: "https://new.carta.tech/kraken-mpa-report"
---

# kraken-mpa-report(1)

assigning taxonomic labels to short DNA sequences

## NAME

kraken-mpa-report - assigning taxonomic labels to short DNA sequences

## SYNOPSIS

**kraken-mpa-report** \[*--db KRAKEN\_DB\_NAME*\] \[*options*\] *\<kraken output file(s)\>*

## OPTIONS

- **--db** NAME

  Name of Kraken database (default: none)

- **--show-zeros**

  Display taxa even if they lack a read in any sample

- **--header-line**

  Display a header line indicating sample IDs (sample IDs are the filenames)

- **--intermediate-ranks**

  Display taxa not at the standard ranks with x\_\_ prefix