NAME
kraken-mpa-report - assigning taxonomic labels to short DNA sequences
SYNOPSIS
kraken-mpa-report [--db KRAKEN_DB_NAME] [options] <kraken output file(s)>
OPTIONS
- --db NAME
-
Name of Kraken database (default: none)
- --show-zeros
-
Display taxa even if they lack a read in any sample
- --header-line
-
Display a header line indicating sample IDs (sample IDs are the filenames)
- --intermediate-ranks
-
Display taxa not at the standard ranks with x__ prefix