NAME
hilive-build - Index creation tool for HiLive - Realtime Alignment of Illumina Reads
SYNOPSIS
hilive-build [options]
OPTIONS
GENERAL OPTIONS:
- -h [ --help ]
-
Print this help message and exit
- -l [ --license ]
-
Print licensing information and exit
REQUIRED OPTIONS:
- -i [ --input ] arg
-
Reference genome(s) in (multi-)FASTA format. [REQUIRED]
- -o [ --out-prefix ] arg
-
Output file prefix. Several files with the same prefix will be created. [REQUIRED]
OTHER OPTIONS:
- --do-not-convert-spaces
-
Do not convert all spaces in reference ids to underscores [Default: converting is on]
- --trim-after-space
-
Trim all reference ids after first space [Default: false]
EXAMPLE
hilive-build --input hg19.fa --out-prefix ./index/hg19
AUTHOR
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.