---
name: "helixturnhelix"
section: "1e"
platform: "linux"
package: "emboss"
version: "6.6.0+dfsg-15"
release: "Debian 13 (Trixie)"
platforms: ["linux"]
url: "https://new.carta.tech/helixturnhelix"
---

# helixturnhelix(1e)

Identify nucleic acid-binding motifs in protein sequences

## NAME

helixturnhelix - Identify nucleic acid-binding motifs in protein sequences

## SYNOPSIS

**helixturnhelix** **-sequence** *seqall* \[**-mean** *float*\] \[**-sd** *float*\] \[**-minsd** *float*\] \[**-eightyseven** *boolean*\] **-outfile** *report*

**helixturnhelix** **-help**

## DESCRIPTION

**helixturnhelix** is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Protein:2D Structure,Protein:Domains" command group(s).

## OPTIONS

### Input section

- **-sequence** *seqall*

  ### Additional section

- **-mean** *float*

  Default value: 238.71

- **-sd** *float*

  Default value: 293.61

- **-minsd** *float*

  Default value: 2.5

- **-eightyseven** *boolean*

  ### Output section

- **-outfile** *report*

  ## BUGS

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group\_id=93650&atid=605031).

## SEE ALSO

helixturnhelix is fully documented via the **tfm**(1) system.

## AUTHOR

**Debian Med Packaging Team** \<debian-med-packaging@lists.alioth.debian.org\>

Wrote the script used to autogenerate this manual page.

## COPYRIGHT

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.