---
name: "haarz"
section: "1"
platform: "linux"
package: "segemehl"
version: "0.3.4-5+b1"
release: "Debian 13 (Trixie)"
platforms: ["linux"]
url: "https://new.carta.tech/haarz"
---

# haarz(1)

Heuristic mapping of short sequences

## NAME

haarz - Heuristic mapping of short sequences

## DESCRIPTION

The program haarz belongs to the segemehl package.

## SYNOPSIS

**haarz** \<program\>

## OPTIONS

### available programs

- callmethyl

  generate methylation vcf from bam

- methylstring

  get SAM file with methylation string annotation

- split

  summarize and annotate segemehl split info

## BUGS

Please report bugs to steve@bioinf.uni-leipzig.de

## REFERENCES

-

  2008 Bioinformatik Leipzig

-

  2018 Leibniz Institute on Aging (FLI)

## AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.