NAME
gthbssmbuild - build splice site model
SYNOPSIS
gthbssmbuild [option ...] genomic_file cDNA_file
DESCRIPTION
Build a BSSM file from a directory tree containing the training data.
OPTIONS
- -bssmfile
-
specify name of BSSM file to store parameters in default: undefined
- -datapath
-
specify root of species-specific training data directory tree default: undefined
- -gtdonor
-
train GT donor model default: no
- -gcdonor
-
train GC donor model default: no
- -agacceptor
-
train AG acceptor model default: no
- -gzip
-
use gzip’ed input files default: no
- -help
-
display help and exit
- -version
-
display version information and exit