NAME
gt-readjoiner - Readjoiner: a string graph-based sequence assembler.
SYNOPSIS
gt readjoiner [option ...] tool [argument ...]
DESCRIPTION
- -help
-
display help and exit
- -version
-
display version information and exit
Please consult the Readjoiner manual for more information.
Tools:
• prefilter prepare the readset for Readjoiner
• overlap calculate suffix-prefix matches
• assembly construct string graph and output contigs
REPORTING BUGS
Report bugs to https://github.com/genometools/genometools/issues.