NAME
graphlan_annotate - GraPhlAn annotate module
SYNOPSIS
graphlan_annotate [-h] [--annot annotation_file] [-v] input_tree [output_tree]
DESCRIPTION
GraPhlAn is a software tool for producing high-quality circular representations of taxonomic and phylogenetic trees. It focuses on concise, integrative, informative, and publication-ready representations of phylogenetically- and taxonomically-driven investigation.
graphlan_annotate is the annotate module of graphlan(1).
OPTIONS
positional arguments:
- input_tree
-
the input tree in Newick, Nexus, PhyloXML or plain text format
- output_tree
-
the output tree in PhyloXML format containing the newly added annotations. If not specified, the input tree file will be overwritten
optional arguments:
- -h, --help
-
show this help message and exit
- --annot annotation_file
-
specify the annotation file
- -v, --version
-
Prints the current GraPhlAn version and exit
SEE ALSO
AUTHOR
The software was written by Nicola Segata <[email protected]>
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.