---
name: "genotype2mipe"
section: "1"
platform: "linux"
package: "mipe"
version: "1.1-9"
release: "Debian 13 (Trixie)"
platforms: ["linux"]
url: "https://new.carta.tech/genotype2mipe"
---

# genotype2mipe(1)

Inserts SNP data into MIPE file based on MIPE version v0.9 Make sure SNPs are already defined in the USE part of the PCR record. arguments: \* mipe\_file \* STDIN: tab-delimited list of data, in the following order: PCR ID, sample ID, SNP ID, ambiguity code

## NAME

genotype2mipe.pl - Inserts SNP data into MIPE file\
   based on MIPE version v0.9\
   Make sure SNPs are already defined in the USE part of the PCR record.\
   arguments: \* mipe\_file\
              \* STDIN: tab-delimited list of data, in the following order:\
 	           PCR ID, sample ID, SNP ID, ambiguity code

## SYNOPSIS

snp2mipe.pl my\_file.mipe \< my\_data.txt

## ADDITIONAL INFO

See http://mipe.sourceforge.net

## AUTHOR

Jan Aerts (jan.aerts@bbsrc.ac.uk)