NAME
gbf2facds - convert NCBI GenBank flatfile coding sequences to FASTA
SYNOPSIS
gbf2facds [[-]nuc|[-]NUC|[-]na|[-]NA|[-]prt|[-]PRT|[-]aa|[-]AA]
DESCRIPTION
gbf2facds reads an NCBI GenBank flatfile from standard input and writes FASTA corresponding to its (optionally translated) coding regions to standard output.
OPTIONS
- [-]nuc|[-]NUC|[-]na|[-]NA
-
Print transcribed nucleotides (default).
- [-]prt|[-]PRT|[-]aa|[-]AA
-
Print translated amino acids.
SEE ALSO
csv2xml(1), efetch(1), gbf2fsa(1), gbf2info(1), gbf2tbl(1), xtract(1).