NAME
fps2sga.pl - convert fps to sga
DESCRIPTION
-
fps2sga.pl [options] <FPS file>
-
where options are:
- -h|--help
-
Show this stuff
- -f|--feature <feature>
-
Set Feature name <feature>
- -s|--species <species>
-
Assembly <species> (i.e hg18)
- -x
-
Generate an extended SGA file with the 6th field equal to the FPS 'description' field
- --ignore0flag
-
Ignore 0 flag at position 29 of the FP line, so keep orientation the same as original
AUTHOR
This manpage was written by Andreas Tille for the Debian distribution and
can be used for any other usage of the program.