filter-record1
Filter structured files
Part of filter-genbank(1).
Usage
filter-genbank [{-accession
acc | -accessions
file}]
[{-taxid
id | -taxids
file}]
[-organism
name]
[-exclude
str]
[-require
str]
[-truncate]
filter-record [-pattern
str]
[-exclude
str]
[-require
str]
[-min
N]
[-max
N]
Overview
These commands simply invoke corresponding transmute(1) modes; each reads a stream of data from standard input, filters it as desired, and writes the result to standard output. Specifically, filter-genbank corresponds to transmute -gbf, filtering NCBI GenBank/GenPept release flatfiles, and filter-record corresponds to transmute -txf, filtering any text file whose records all start with the same distinct string.
Options
See transmute(1).